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| Clone Mass | Clones in CloneSet | Parameter Count | Clone Similarity | Syntax Category [Sequence Length] |
|---|---|---|---|---|
| 5 | 4 | 3 | 0.977 | stmt_list[5] |
| Clone Abstraction | Parameter Bindings |
| Clone Instance (Click to see clone) | Line Count | Source Line | Source File |
|---|---|---|---|
| 1 | 5 | 310 | Bio/AlignIO/PhylipIO.py |
| 2 | 5 | 316 | Bio/AlignIO/PhylipIO.py |
| 3 | 5 | 363 | Bio/AlignIO/PhylipIO.py |
| 4 | 5 | 379 | Bio/AlignIO/PhylipIO.py |
| ||||
handle = StringIO(phylip_text2)
list2 = list(PhylipIterator(handle))
handle.close( )
assert len(list2)==1
assert len(list2[0].get_all_seqs( ))==5
|
| ||||
handle = StringIO(phylip_text3)
list3 = list(PhylipIterator(handle))
handle.close( )
assert len(list3)==1
assert len(list3[0].get_all_seqs( ))==5
|
| ||||
handle = StringIO(phylip_text4)
list4 = list(PhylipIterator(handle))
handle.close( )
assert len(list4)==1
assert len(list4[0].get_all_seqs( ))==5
|
| ||||
handle = StringIO(phylip_text5a)
list5 = list(PhylipIterator(handle))
handle.close( )
assert len(list5)==1
assert len(list4[0].get_all_seqs( ))==5
|
| |||
handle = StringIO( [[#variable78a2df20]]) [[#variable754746a0]]= list(PhylipIterator(handle)) handle.close( ) assert len( [[#variable754746a0]])==1 assert len( [[#variable754753c0]][0].get_all_seqs( ))==5 |
| CloneAbstraction |
| Parameter Index | Clone Instance | Parameter Name | Value |
|---|---|---|---|
| 1 | 1 | [[#78a2df20]] | phylip_text5a |
| 1 | 2 | [[#78a2df20]] | phylip_text4 |
| 1 | 3 | [[#78a2df20]] | phylip_text3 |
| 1 | 4 | [[#78a2df20]] | phylip_text2 |
| 2 | 1 | [[#754746a0]] | list5 |
| 2 | 2 | [[#754746a0]] | list4 |
| 2 | 3 | [[#754746a0]] | list3 |
| 2 | 4 | [[#754746a0]] | list2 |
| 3 | 1 | [[#754753c0]] | list4 |
| 3 | 2 | [[#754753c0]] | list4 |
| 3 | 3 | [[#754753c0]] | list3 |
| 3 | 4 | [[#754753c0]] | list2 |