CloneSet383


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Clone
Mass
Clones in
CloneSet
Parameter
Count
Clone
Similarity
Syntax Category
[Sequence Length]
6260.955test_pair_plus
Clone AbstractionParameter Bindings
Clone Instance
(Click to see clone)
Line CountSource Line
Source File
161638
Bio/Blast/NCBIStandalone.py
261757
Bio/Blast/NCBIStandalone.py
Clone Instance
1
Line Count
6
Source Line
1638
Source File
Bio/Blast/NCBIStandalone.py

        "matrix":"-M","gap_open":"-G","gap_extend":"-E","nuc_match":"-r","nuc_mismatch":"-q","query_genetic_code":"-Q"


Clone Instance
2
Line Count
6
Source Line
1757
Source File
Bio/Blast/NCBIStandalone.py

        "matrix":"-M","gap_open":"-G","gap_extend":"-E","window_size":"-A","npasses":"-j","passes":"-P"


Clone AbstractionParameter Count: 6Parameter Bindings

"matrix":"-M","gap_open":"-G","gap_extend":"-E", [[#variable5e4e3900]]: [[#variable5e4e3880]], [[#variable5e4e37e0]]: [[#variable5e4e3740]], [[#variable5e4e36a0]]: [[#variable5e4e3620]]
 

CloneAbstraction
Parameter Bindings
Parameter
Index
Clone
Instance
Parameter
Name
Value
11[[#5e4e3900]]
"nuc_match" 
12[[#5e4e3900]]
"window_size" 
21[[#5e4e3880]]
"-r" 
22[[#5e4e3880]]
"-A" 
31[[#5e4e37e0]]
"nuc_mismatch" 
32[[#5e4e37e0]]
"npasses" 
41[[#5e4e3740]]
"-q" 
42[[#5e4e3740]]
"-j" 
51[[#5e4e36a0]]
"query_genetic_code" 
52[[#5e4e36a0]]
"passes" 
61[[#5e4e3620]]
"-Q" 
62[[#5e4e3620]]
"-P"